Explore projects

Shiny app for exploration and disambiguation of FROGS multi-affiliation

Validation of a qualitative risk assessment of Foot-and-Mouth Disease in Tunisia with observed data. https://umr-astre.pages.mia.inra.fr/fmd_risk_validation/

Collaborative repository of the ASTRE team for the ASF challenge. https://www6.inrae.fr/asfchallenge/

R package for recovering and preparing useful data for damage appraisal in a French context

A method to compare a clustering to a classification with ordinal classes.

Transcriptomic results of the projet of Bonnet et al

Epidemics at the interface between domestic and wild swines in Corse (ContActs Pigs CorsE). https://umr-astre.pages.mia.inra.fr/capiche/

Code to reproduce the results of "Gene regulatory network inference methodology for genomic and transcriptomic data acquired in genetically related heterozygote individuals", https://doi.org/10.1093/bioinformatics/btac445

Dispersion of Culicoides imicola using friction maps https://umr-astre.pages.mia.inra.fr/culicoides-friction

https://umrf.pages.mia.inra.fr/ranomaly/

Construction and Analysis of Protein-Protein Interactions (PPI) NETWORKS for complexes and biological processes

Some R codes and a package (in beta) for changepoint detection in trees (with model selection and dynamic programming). It is based on the Ph.D. work of Solène Thépaut (Chapter 3, see: https://tel.archives-ouvertes.fr/tel-02457109/document)

Life game (Conway) using vle::discrete_time cells and vle.generic.builder Builder model to generate cells and their connexions

A quick overview of the changes of Covid-19 mortality in the most affected countries of the European Union + the United Kingdom and of Africa. https://umr-astre.pages.mia.inra.fr/covid19-mortality/