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Source code for https://iant.toulouse.inra.fr/T3E

Tutorial example for creation of a snakemake workflow using a singularity container on a hpc

Tutorial example for creation of a snakemake workflow using a singularity container on a hpc

Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variations detection.

report from a BAM alignment the number of BX:Z: tags shared between to blocks of given size

TilSeg is a tool designed to use the information from contiguous probes and it will merge them into longer segment stretches. Depending on the experiment, the chip type and the statistical analysis made, those segments may have different meanings and

The software enable to retrieve information (exon boundaries, mutation effect, known SNP...) about transcribed SNP. It's based on ensembl API.

UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase

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