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mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel
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urgi-is / FAIDARE
Creative Commons Attribution 4.0 InternationalFAIDARE: FAIR Data-finder for Agronomic Research
It provides web services (based on the BrAPI standard) and a web interface with easy to use filters to facilitates the access to plant datasets from a federation of sources.
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PO2-Tools / PO²Manager
MIT LicenseUpdated -
Package R with a shiny interface to run an interactive differential gene/region expression analysis.
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UMR-ASTRE / mapMCDA
GNU General Public License v3.0 onlyProduce an epidemiological risk map by weighting multiple risk factors. https://umr-astre.pages.mia.inra.fr/mapMCDA/
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anaee-dev / OpenAdom
OtherProjet de la version V2 de l'application des ORE.Le projet est constitué de 2 sous projet :
La partie serveur qui fournit les web services de l'application
La partie UI qui fournit une interface VueJS permettant d'interroger ces Web Service
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migale / Easy16S
GNU Affero General Public License v3.0Updated -
Exploitation et maintenance du thésaurus INRAE, thésaurus ouvert et partagé couvrant les domaines de recherche d’INRAE. Il sert de référentiel au sein de l’institut pour indexer et annoter des documents, pages web, descriptions d’activités, jeux de d
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GeT-nextflow-NGL-Bi / wf-Illumina-nf
CeCILL Free Software License Agreement v2.1Pipeline Nextflow
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PO2-Tools / PO²Engine
MIT LicenseUpdated -
beyond / Beyond Si
CeCILL-B Free Software License AgreementUpdated -
Etienne Rifa / GraphstatsR
MIT LicenseUpdated -
GEAPSI-Bioinfo / pipeline / specifics_Ortho_KB
MIT LicenseNextflow pipeline creating a Neo4j Ortho_KB database.
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PAPPSO / i2MassChroQ
GNU General Public License v3.0 onlyi2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution
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urgi-is / Datadiscovery Partners Indexers
BSD 3-Clause "New" or "Revised" LicenseCollection of indexer for FAIDARE, WheatIS,
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