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Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.

Pipeline Nextflow

Docker image with Intel Fortran Compiler (and some other dev tools).

dbeel integration

Hosts the different implementation of EDA model

FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.

This project aims to create a opensilex instance running on docker-compose stack

Contribution à la réalisation du "pilote" INRAE, dans le cadre du programme européen GraspOS

scripts to remap markers as pairs of bait sequences or context sequences.

RNAseq and EMseq analyses for the rosepigs project on stomach mucosa samples