analyze ORF / analyze Protein
Input :
- 3 mandatory entries : initial contig fasta, modified contig fasta, contig scoring table
- 1 non mandatory entry : protein fasta
Output :
- modified scoring table
Feature :
- merge the modules : analyzeORF and analyzeProt
- add the fasta protein bank indexing by diamond
- do not modify contig if less than 20% of the length is kept after intron removal