From 4ae146ce2a5576f5d791360faa98febaf00e0e67 Mon Sep 17 00:00:00 2001
From: pbardou <philippe.bardou@inra.fr>
Date: Wed, 15 May 2019 15:18:12 +0200
Subject: [PATCH] IMAGE_calling bug in type of option nb_in_cohort

---
 Snakemake/IMAGE_calling/config.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/Snakemake/IMAGE_calling/config.yaml b/Snakemake/IMAGE_calling/config.yaml
index 86e2169..6dedaac 100755
--- a/Snakemake/IMAGE_calling/config.yaml
+++ b/Snakemake/IMAGE_calling/config.yaml
@@ -38,7 +38,7 @@ genotype_variant_threshold: ""  #Default=0: Limit posterior integration to sampl
 adjust_mapping_quality: ""      #Default=50 : adjust mapping quality
 
 # Number of GATK gvcf file to merge in cohort (combineGVCF) before GenotypeGVCF)
-nb_in_cohort: "" # Default=60
+nb_in_cohort:  # Default=60
 
 ##### Software paths #####
 
-- 
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