Commit 99cb417d authored by Slaheddine Kastalli's avatar Slaheddine Kastalli
Browse files

Delete dada2.R

parent e4dff133
library(dada2)
derep <- derepFastq(snakemake@input[[1]], verbose = TRUE)
err <- learnErrors(snakemake@input[[1]], multithread = snakemake@threads, verbose = TRUE)
dada <- dada(derep, err = err, multithread = snakemake@threads, verbose = TRUE)
saveRDS(dada, snakemake@output[[1]])
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