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Cedric Midoux
deepomics16S
Commits
99cb417d
Commit
99cb417d
authored
Mar 23, 2021
by
Slaheddine Kastalli
Browse files
Delete dada2.R
parent
e4dff133
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workflow/script/dada2.R
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e4dff133
library
(
dada2
)
derep
<-
derepFastq
(
snakemake
@
input
[[
1
]],
verbose
=
TRUE
)
err
<-
learnErrors
(
snakemake
@
input
[[
1
]],
multithread
=
snakemake
@
threads
,
verbose
=
TRUE
)
dada
<-
dada
(
derep
,
err
=
err
,
multithread
=
snakemake
@
threads
,
verbose
=
TRUE
)
saveRDS
(
dada
,
snakemake
@
output
[[
1
]])
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