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bios4biol
bioinfo-utils
Commits
b684e342
Commit
b684e342
authored
Nov 05, 2018
by
Celine Noirot
Browse files
add igraph library
parent
063fede3
Changes
1
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bin/DEG.R
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b684e342
...
...
@@ -18,12 +18,13 @@ packages <- c("optparse", # to read arguments from a command line
"gridExtra"
,
# multiple plots on one page
"grid"
,
# multiple plots on one page for MAplots
"RColorBrewer"
,
# color in plots
"igraph"
,
# new unmet dependency for mixOmics
"mixOmics"
,
# for heatmap plot
"reshape2"
,
# reshape grouped data
"knitr"
,
# create a pdf file with images
"markdown"
,
# create a pdf file with images
"RJSONIO"
)
# work with JSON file
"RJSONIO"
)
# work with JSON file
for
(
package
in
packages
){
# if package is installed locally, load
if
(
!
(
package
%in%
rownames
(
installed.packages
())))
{
...
...
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