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bios4biol
bioinfo-utils
Commits
3f1cda9a
Commit
3f1cda9a
authored
Feb 24, 2015
by
Claire Hoede
Browse files
correct help
parent
e6e1a476
Changes
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bin/getNbAllAllelesFromVcf.py
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3f1cda9a
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@@ -34,7 +34,7 @@ __description__ = """Write a tabulated file with count
of each read for each alternative allele whatever the alleles number.
The objective is to import the file in R to compute real alleles frequencies.
Columns in the output file will be
#chrom #pos #nbAlt
All
#DPTotal #nbRef #nbAlt1 ... #nbAltn
#chrom #pos #nbAlt #DPTotal #nbRef #nbAlt1 ... #nbAltn
WARNING : for this first version your vcf file has to have only one sample
In the output file column not used for a variant is filled by NA"""
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