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Commit 140885fd authored by Celine Noirot's avatar Celine Noirot
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Add new script and some update

parent d806fc9b
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doc/scripts.html
View file @ 140885fd
......@@ -142,3 +142,4 @@
</div>
</body>
</html>
doc/scripts_to_json.pl 0 → 100755
View file @ 140885fd
#!/usr/bin/perl
use strict;
use warnings;
use Cwd;
use Getopt::Long;
use Pod::Usage;
my %options;
my $cur_dir=cwd();
my $first=1;
my $nb_scripts=0;
my $nb_correct_scripts=0;
Getopt::Long::Configure("no_ignorecase");
Getopt::Long::Configure("bundling");
GetOptions( \%options,
'file|f=s',
'directory|d=s',
'help|h',
'man') or pod2usage(-verbose => 1);
pod2usage(-verbose => 1,-noperldoc => 1) if (exists $options{'help'});
pod2usage(-verbose => 2,-noperldoc => 1) if (exists $options{'man'});
pod2usage(-message => "A file or a directory must be provided ! (-f or -d)",-verbose => 1) if ( (!exists $options{'file'}) && (!exists $options{'directory'}) );
####STORE WRONG FILES#################
open (WRONG,">wrong_scripts.txt") or die "unable to open file \"wrong_scripts.txt\"\n";
######################################
####PREPARE JSON FILE#################
open(JSON,">out.json") or die "Unable to open out.json\n";
print JSON "{\"scriptotheque\":{";
######################################
### SCAN ONE FILE
if(exists($options{'file'})){
my $file = $options{'file'};
print "Scanning file ",$file,"\n";
my $fic=$file;
&scan_file($fic,1);
}
else{
$cur_dir=$options{'directory'};
print "Scanning ",$cur_dir,"\n";
opendir(my $dh, $cur_dir);
my @files = grep { -f "$cur_dir/$_" } readdir($dh);
foreach my $fic (@files){
&scan_file($cur_dir."/".$fic, scalar(@files));
}
}
print JSON "}\n}";
close JSON;
system 'sed -i -e "s/>/\&#62;/g" -e "s/</\&#60;/g" out.json';
close WRONG;
my $doc_perl = "\n\nEXAMPLE OF DOCUMENTATION FOR PERL SCRIPTS : \
#!/usr/bin/perl
use strict;
use warnings;
use Getopt::Long;
use Pod::Usage;
my( \$opt_help, \$opt_man, \$opt_full, \$opt_admins, \$opt_choose, \$opt_createdb );
GetOptions(
'help' => \$opt_help,
'man' => \$opt_man,
)
or pod2usage( \"Try '\$0 --help' for more information.\");
pod2usage( -verbose => 1 ) if \$opt_help;
pod2usage( -verbose => 2 ) if \$opt_man;
# Main
print \"Coucou\";
\=pod
\=head1 NAME
mon_script.pl
\=head1 SYNOPSIS
mon_script.pl [options]
\=head1 DESCRIPTION
mon_script.pl prints Coucou
\=head1 AUTHORS
Author
\=head1 VERSION
1
\=head1 DATE
05/2012
\=head1 KEYWORDS
bidule bidou
\=head1 EXAMPLE
perl mon_script.pl > STDOUT
\=cut
";
my $doc_python = "\n\nEXAMPLE OF DOCUMENTATION FOR PYTHON SCRIPTS : \
__name__ = \"mon_script.py\"
__synopsis__ = \"mon_script.py |OPTIONS]\"
__example__ = \"python mon_script.py > STDOUT\"
__date__ = \"05/2012\"
__authors__ = \"Author\"
__keywords__ = \"bidule bidou\"
__description__ = \"mon_script.pl prints Coucou\"
";
my $doc_bash = "\n\nEXAMPLE OF DOCUMENTATION FOR BASH SCRIPTS : \
##NAME = \"mon_script.sh\"
##SYNOPSIS = \"mon_script.sh |OPTIONS]\"
##EXAMPLE = \"sh mon_script.sh > STDOUT\"
##DATE = \"05/2012\"
##AUTHORS = \"Author\"
##KEYWORDS = \"bidule bidou\"
##DESCRIPTION = \"mon_script.sh prints Coucou\"
";
if (-s "wrong_scripts.txt"){
`rm -f out.json`;
open (WRONG,">>wrong_scripts.txt");
print "See wrong_scripts.txt to see bad documented files\n";
print WRONG "\n-----------------------------------------------------------------------------------------";
print WRONG $doc_perl;
print WRONG $doc_python;
print WRONG $doc_bash;
close WRONG;
}
#`cp out.json /work/sigenae/OLIVIER/POD/OK2`;
sub scan_file(){
my $fic=shift;
my $nbfile=shift;
#my $f="${cur_dir}/$fic";
my ($name, $synopsis, $date, $authors, $keywords, $description)=("","","","","","");
my $error_msg="";
$nb_scripts++;
#### PERL FILES########################################################################################
if($fic=~/.*\.pl/){
my $verif = (`/usr/bin/podchecker -nowarnings $fic 2>&1 >/dev/null`);
#print "-----",$verif,"\n";
if ($verif =~ m/syntax OK/){
$name = `/usr/bin/podselect -section NAME $fic | sed s/'=head1.*'//`;
$name =~ s/[\t|\n]//g;
$synopsis = `/usr/bin/podselect -section SYNOPSIS $fic | sed s/'=head1.*'//`;
$synopsis =~ s/[\t|\n]//g;
$date = `/usr/bin/podselect -section DATE $fic | sed s/'=head1.*'//`;
$date =~ s/[\t|\n]//g;
$authors = `/usr/bin/podselect -section AUTHORS $fic | sed s/'=head1.*'//`;
$authors =~ s/[\t|\n]//g;
$keywords = `/usr/bin/podselect -section KEYWORDS $fic | sed s/'=head1.*'//`;
$keywords =~ s/[\t|\n]//g;
my $res_description = `/usr/bin/podselect -section DESCRIPTION $fic | sed s/'=head1.*'//`;
my @a_desc = split("\n",$res_description);
my $i=0;
while ( $i <= $#a_desc && $description eq "")
{
my $line = $a_desc[$i];
if ($line !~ /^\s+$/ )
{
$description=$line;
}
$i ++;
}
close FIC;
}
else{
$error_msg= $fic." is wrong, use podchecker -nowarnings $fic\n";
}
}
#######################################################################################################
#### PYTHON FILES######################################################################################
if($fic=~/.*\.py/){
open FIC, "$fic" or warn "$fic E/S: $!\n";
my $nb_field=0;
while(<FIC>){
chomp;
#print $_,"\n";
if ($_ =~ m/^__name__/g){
($name) = $_ =~ m/^__name__ = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^__synopsis__/g){
($synopsis) = $_ =~ m/__synopsis__ = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^__date__/g){
($date) = $_ =~ m/__date__ = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^__authors__/g){
($authors) = $_ =~ m/__authors__ = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^__keywords__/g){
($keywords) = $_ =~ m/__keywords__ = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^__description__/g){
($description) = $_ =~ m/__description__ = "([^"]+)"/;
$nb_field++;
}
}
if ($nb_field < 6)
{
$error_msg="$fic is wrong\n";
}
close FIC;
}
#### BASH FILES########################################################################################
if($fic=~/.*\.sh/){
open FIC, "$fic" or warn "$fic E/S: $!\n";
my $nb_field=0;
while(<FIC>){
chomp;
if ($_ =~ m/^##NAME/gi){
($name) = $_ =~ m/##NAME = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##SYNOPSIS/g){
($synopsis) = $_ =~ m/##SYNOPSIS = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##DATE/g){
($date) = $_ =~ m/##DATE = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##AUTHORS/g){
($authors) = $_ =~ m/##AUTHORS = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##KEYWORDS/g){
($keywords) = $_ =~ m/##KEYWORDS = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##DESCRIPTION/g){
($description) = $_ =~ m/##DESCRIPTION = "([^"]+)"/;
$nb_field++;
}
}
if ($nb_field<6){
$error_msg="$fic is wrong";
}
close FIC;
}
#######################################################################################################
#### R FILES###########################################################################################
if($fic=~/.*\.R/){
open FIC, "$fic" or warn "$fic E/S: $!\n";
my $nb_field=0;
while(<FIC>){
chomp;
if ($_ =~ m/^##NAME/gi){
($name) = $_ =~ m/##NAME = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##SYNOPSIS/g){
($synopsis) = $_ =~ m/##SYNOPSIS = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##DATE/g){
($date) = $_ =~ m/##DATE = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##AUTHORS/g){
($authors) = $_ =~ m/##AUTHORS = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##KEYWORDS/g){
($keywords) = $_ =~ m/##KEYWORDS = "([^"]+)"/;
$nb_field++;
}
if ($_ =~ m/^##DESCRIPTION/g){
($description) = $_ =~ m/##DESCRIPTION = "([^"]+)"/;
$nb_field++;
}
}
if ($nb_field<6){
$error_msg="$fic is wrong";
}
close FIC;
}
#######################################################################################################
if ($error_msg ne "")
{
my $field ="";
$field .="name " if ($name eq "");
$field .="synopsis " if ($synopsis eq "");
$field .="date " if ($date eq "");
$field .="authors " if ($authors eq "");
$field .="keywords " if ($keywords eq "");
$field .="description " if ($description eq "");
print WRONG $error_msg ."\t\t expected field: ". $field. " $name,$synopsis,$date,$authors,$keywords,$description \n";
}
else
{
print JSON "\n\"$nb_correct_scripts\": ";
print JSON &write_sections($name,$synopsis,$date,$authors,$keywords,$description);
print $fic," is ok\n";
print JSON "," if ($nbfile != $nb_scripts);
$nb_correct_scripts++;
}
}
sub write_sections($$){
my $name = shift;
my $synopsis = shift;
my $date = shift;
my $authors = shift;
my $keywords = shift;
my $description = shift;
$name=~s/^\s+//;
$name=~s/\s+$//;
$synopsis=~s/^\s+//;
$synopsis=~s/\s+$//;
$description=~s/^\s+//;
$description=~s/\s+$//;
$description=~s/\t//;
$date=~s/^\s+//;
$date=~s/\s+$//;
$authors=~s/^\s+//;
$authors=~s/\s+$//;
$keywords=~s/^\s+//;
$keywords=~s/\s+$//;
my $string="";
$string = "\n{\n\"name\": \"$name\",\n\"synopsis\": \"$synopsis\",\n\"description\": \"$description\",\n\"date\": \"$date\",\n\"authors\": \"$authors\",\n\"keywords\": \"$keywords\"\n}\n";
return $string;
}
=pod
=head1 NAME
scrips_to_json.pl
=head1 SYNOPSIS
./scripts_to_json.pl [-d DIR] [-f FILE] [-h] [--man]
=head1 DESCRIPTION
Writes a JSON file from a file or a directory passed in parameter.
Works with PERL, PYTHON and BASH scripts.
If your script(s) is/are not well documented, the file wrong_scripts.txt is created and contains bad scripts.
If not, a JSON file containing documentation elements is created.
=head1 AUTHORS
Olivier Rué, Céline Noirot
=head1 VERSION
1
=head1 DATE
05/2013
=head1 KEYWORDS
check documentation scriptotheque
=head1 EXAMPLE
./scripts_to_json.pl -d .
=cut
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