This project is designed to extract entities (i.e., `taxa`, `phenotypes`, `habitats`, `disease names`, `hosts`, `pathogen`, `vector`, `dates` and `geographic names`) from textual data for the purpose of scientific watch.
It contains a pipeline based on Framework [AlvisNLP](https://github.com/Bibliome/alvisnlp) and uses the Ontobiotope Ontology and NCBI taxonomy.
It contains a workflow based on Framework [AlvisNLP](https://github.com/Bibliome/alvisnlp) and uses the Ontobiotope Ontology and NCBI taxonomy.
