Package: GenomeFeatures
Version: 1.1
Title: Multiple genomic features annotations
Author: Aurelien Brionne [aut, cre]
Maintainer: Aurelien Brionne <aurelien.brionne@inrae.fr>
Depends: R (>= 3.6)
Imports: AnnotationDbi,
        BiocGenerics,
        data.table,
        GenomicFeatures,
        GenomicRanges,
        IRanges,
        methods,
        plotly,
        rtracklayer,
        S4Vectors,
        UpSetR
Suggests: htmltools,
          org.Mm.eg.db,
          Rgraphviz,
          BiocStyle,
          knitr,
          rmarkdown,
          corrplot,
          remotes,
          BiocManager
Description: The aim of this package is to provide a full genomic features annotation from genomic coordinates, without use an annotation priority.
VignetteBuilder: knitr
License: GPL-3
URL: https://forgemia.inra.fr/aurelien.brionne/GenomeFeatures
BugReports: https://forgemia.inra.fr/aurelien.brionne/GenomeFeatures/issues
RoxygenNote: 7.1.1
Collate: 
    'GFF_att.R'
    'overlapped_genome_features.R'
    'Plot.R'
    'Table.R'
    'genome_features.R'
    'build_genome_features.R'
    'genome_features_overlaps.R'
    'readPeakFile.R'