# GenomeFeatures R package The aim of this package is to provide a full genomic features annotation from genomic coordinates, without use an annotation priority. ## Installation ```r remotes::install_gitlab( "aurelien.brionne/GenomeFeatures", host = "forgemia.inra.fr", build_opts = c("--no-resave-data", "--no-manual") ) ``` ## Quick overview 1. load peaks file: `GenomeFeatures::readPeakFile`. 2. Build a convenient object for find overlaps beetween all selected features and genomic coordinates targets: `GenomeFeatures::build_genome_features`. 3. Find overlaps beetween genomic coordinates and features: `GenomeFeatures::genome_features_overlaps`. 4. Features plot: `GenomeFeatures::Plot`. ![](./inst/extdata/barplot.png) ![](./inst/extdata/lineplot.png) 5. Get annotation table: `GenomeFeatures::Table`. ![](./inst/extdata/table.png) 6. Features ovelaps. ![](./inst/extdata/data/output/upset_A.png)