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Package: GenomeFeatures
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Version: 1.1
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Title: Multiple genomic features annotations
Author: Aurelien Brionne [aut, cre]
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Maintainer: Aurelien Brionne <aurelien.brionne@inrae.fr>
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Depends: R (>= 3.6)
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Imports: AnnotationDbi,
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        BiocGenerics,
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        data.table,
        GenomicFeatures,
        GenomicRanges,
        IRanges,
        methods,
        plotly,
        rtracklayer,
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        S4Vectors,
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        UpSetR
Suggests: htmltools,
          org.Mm.eg.db,
          Rgraphviz,
          BiocStyle,
          knitr,
          rmarkdown,
          corrplot,
          remotes,
          BiocManager
Description: The aim of this package is to provide a full genomic features annotation from genomic coordinates, without use an annotation priority.
VignetteBuilder: knitr
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License: GPL-3
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URL: https://forgemia.inra.fr/aurelien.brionne/GenomeFeatures
BugReports: https://forgemia.inra.fr/aurelien.brionne/GenomeFeatures/issues
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RoxygenNote: 7.1.1
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Collate: 
    'GFF_att.R'
    'overlapped_genome_features.R'
    'Plot.R'
    'Table.R'
    'genome_features.R'
    'build_genome_features.R'
    'genome_features_overlaps.R'
    'readPeakFile.R'