update with cartobio generated patches

src/main/java/fr/inrae/agriterix/generator/Generator.java

@@ -101,6 +101,11 @@ public class Generator {
                 int id_expl = ((Long) feature.getAttribute("id_expl")).intValue();
                 String codecult = (String) feature.getAttribute("codecultco");
                 Double surface = (Double) feature.getAttribute("surf_ilot");
+                CulturalPractice practice = CulturalPractice.I;
+                Double bio = ((Double) feature.getAttribute("BIO"));
+                if (bio == 1.0) {
+                    practice = CulturalPractice.O;
+                }
                 int patch_id = Integer.parseInt((String) feature.getAttribute("ID_PARCEL"));
                 // Store the product if needed, retrieve it otherwise
                 Product product;
@@ -119,7 +124,7 @@ public class Generator {
                     farmersID.put(id_expl, farmer);
                 }
                 // Create and add the patch to the area
-                Patch patch = new Patch(area, surface.floatValue(), CulturalPractice.I, product, farmer.getFarm(), patch_id);
+                Patch patch = new Patch(area, surface.floatValue(), practice, product, farmer.getFarm(), patch_id);
                 patches.add(patch);
                 area.getPatches().add(patch);
             }

src/main/java/fr/inrae/agriterix/simulator/Simulator.java

@@ -322,7 +322,6 @@ public class Simulator {
     }
 
 
-    // fixit crashed
     public static void main(String[] args) throws Exception {
         Options options = new Options();
         Option inputFile = new Option("i", "input", true, "Simulation input file");

src/main/java/fr/inrae/agriterix/simulator/dynamics/StateDynamics.java

@@ -3,7 +3,6 @@ package fr.inrae.agriterix.simulator.dynamics;
 import fr.inrae.agriterix.simulator.*;
 
 import java.io.IOException;
-import java.util.ArrayList;
 import java.util.Arrays;
 import java.util.List;