Commits · 4c1779a48ad5ad617a59888b194dbb0d7774fc5a · QTL / spell-qtl

15 Oct, 2013 3 commits
- Made lazy evaluations not lazy anymore. · 4c1779a4
  Damien Leroux authored Oct 15, 2013
  
  4c1779a4
- Added TTY check on start, so it doesn't output garbage when it shouldn't. · 94ec6fe1
  Damien Leroux authored Oct 15, 2013
  
  94ec6fe1
- Added threadpooling code. And modified it. · 94552bf0
  Damien Leroux authored Oct 15, 2013
  
  94552bf0
11 Oct, 2013 1 commit
- Implemented permutation and quantiles and stuff. · 5fae9693
  Damien Leroux authored Oct 11, 2013
  
  5fae9693
10 Oct, 2013 1 commit
- Massive reorganization. · f6f86e1c
  Damien Leroux authored Oct 10, 2013
  
  f6f86e1c
25 Sep, 2013 1 commit
- Work in progress. POP computation not satisfying yet. · 29dcc482
  Damien Leroux authored Sep 25, 2013
  
  29dcc482
16 Sep, 2013 1 commit
- Implemented -log10(pvalue(F-test)). · dd689f2f
  Damien Leroux authored Sep 16, 2013
  
  dd689f2f
13 Sep, 2013 1 commit
- Started implementation of statistical model. · 6a2dabd3
  Damien Leroux authored Sep 13, 2013
  
  6a2dabd3
04 Sep, 2013 1 commit
- Caching system works. It seems. · f274f2c2
  Damien Leroux authored Sep 04, 2013
  
  f274f2c2
29 Aug, 2013 5 commits
- Merge branch 'master' of... · b63d0c9e
  Damien Leroux authored Aug 29, 2013
```
Merge branch 'master' of git+ssh://scm.mulcyber.toulouse.inra.fr//var/lib/gforge/chroot/scmrepos/git/spel/spel
```
  b63d0c9e
- work in progress. · 51a565e0
  Damien Leroux authored Aug 29, 2013
  
  51a565e0
- Merge branch 'master' of... · e5e0561b
  Sylvain Jasson authored Aug 29, 2013
```
Merge branch 'master' of git+ssh://scm.mulcyber.toulouse.inra.fr//var/lib/gforge/chroot/scmrepos/git/spel/spel
```
  e5e0561b
- work in progress. · b8593101
  Damien Leroux authored Aug 29, 2013
  
  b8593101
- Paper draft ( may evolve to Nature Genetics Technical Report) · acd44f59
  Sylvain Jasson authored Aug 29, 2013
  
  acd44f59
26 Aug, 2013 1 commit
- Improved API to computed values and collections. · b4bd2f58
  Damien Leroux authored Aug 26, 2013
  
  b4bd2f58
23 Aug, 2013 1 commit

Improved interface to define tasks, fixed nasty bugs and forced task lists to... · 94ecaebd

Damien Leroux authored Aug 23, 2013

Improved interface to define tasks, fixed nasty bugs and forced task lists to contain pointers instead of instances to prevent copies.

94ecaebd

22 Aug, 2013 1 commit
- Caching system works with basic functionality. · 8a296073
  Damien Leroux authored Aug 22, 2013
  
  8a296073
20 Aug, 2013 3 commits
- First attempt at a cache system and abstraction for computations. · 5b6ac72a
  Damien Leroux authored Aug 20, 2013
  
  5b6ac72a
- Added correct string->bool conversion. · a0c4b50a
  Damien Leroux authored Aug 20, 2013
  
  a0c4b50a
- removed a todo message. · 5add99cc
  Damien Leroux authored Aug 20, 2013
  
  5add99cc
08 Aug, 2013 1 commit
- XML I/O implemented and working. · 8d8683cb
  Damien Leroux authored Aug 08, 2013
  
  8d8683cb
07 Aug, 2013 1 commit
- Added 3rd party MD5 code from RSA Data Security. · 79a813db
  Damien Leroux authored Aug 07, 2013
  
  79a813db
01 Aug, 2013 1 commit
- All tests pass. Test code coverage about OK. · 6870b5f9
  Damien Leroux authored Aug 01, 2013
  
  6870b5f9
30 Jul, 2013 1 commit
- Implemented cached and versatile polynoms. · 50d88c16
  Damien Leroux authored Jul 30, 2013
```
In particular, lumping is much faster. So is the segment computation.
```
  50d88c16
29 Jul, 2013 2 commits
- "Catch" header file included so that tests compile. · 01a41282
  Damien Leroux authored Jul 29, 2013
  
  01a41282
- New implementation of polynoms, with some tests. · 939ff866
  Damien Leroux authored Jul 29, 2013
  
  939ff866
19 Jul, 2013 1 commit
- F3 (Fn) Simulator with 1 QTL. · 1a2ee12e
  Damien Leroux authored Jul 19, 2013
  
  1a2ee12e
02 Jul, 2013 3 commits
- Multi-generation observations tested and approved. · 7705bb47
  Damien Leroux authored Jul 02, 2013
  
  7705bb47
- Multi-generation observations now implemented. · ea311ac7
  Damien Leroux authored Jul 02, 2013
  
  ea311ac7
- Added missing files to invoke OLD probapop. · 2e26ad31
  Damien Leroux authored Jul 02, 2013
  
  2e26ad31
10 Jun, 2013 1 commit
- Implemented outbred format and probabilities. · d351995f
  Damien Leroux authored Jun 10, 2013
  
  d351995f
05 Jun, 2013 1 commit
- Faster way to compute probabilities over segments. · 0560d457
  Damien Leroux authored Jun 05, 2013
  
  0560d457
04 Jun, 2013 1 commit
- RIL model works more than not. · d19e58f6
  Damien Leroux authored Jun 04, 2013
  
  d19e58f6
03 Jun, 2013 1 commit
- New model now works great even on RIL data. · c40435d5
  Damien Leroux authored Jun 03, 2013
  
  c40435d5
21 May, 2013 1 commit
- Added BC. · 12f9b636
  Damien Leroux authored May 21, 2013
  
  12f9b636
18 May, 2013 4 commits
- Added missing header. · 2406fe4e
  Damien Leroux authored May 18, 2013
  
  2406fe4e
- Added misc test data files. · a0c67725
  Damien Leroux authored May 18, 2013
  
  a0c67725
- Added requirement to run old probapop. · 72ff77ae
  Damien Leroux authored May 18, 2013
  
  72ff77ae
- Added Makefile. · 789c641c
  Damien Leroux authored May 18, 2013
  
  789c641c
17 May, 2013 1 commit
- After lots of experiments, the algebraic_genotypes model seems to perform VERY well. · ea07914c
  Damien Leroux authored May 17, 2013
  
  ea07914c