End Input File Samples

doc/user_manual/user_manual.tex

@@ -415,6 +415,19 @@ One line per linkage group (space separated) :
 *Chrom3 8 M31 10 M32 10 M33 10 M34 10 M35 10 M36 10 M37 10 M38
 \end{lstlisting}
 
+\subsection{Trait observations}
+\subsubsection{File format}
+As in MapMaker RAW format, without header : one line per trait beginning with starred (*) trait name followed by space separated observations (one numerical observation per individual, {\tt -} means unobserved).  
+\subsubsection{File sample}
+\begin{lstlisting}[frame=single,breaklines=false,caption={Trait observations (.phen)}]
+*trait_1 131.97 113.96 - 125.53 56.31 87.55 73.55 66.6 91.13 5.74 ... 
+*trait_2 149.12 -56.72 104.56 100.54 88.49 102.0 65.75 121.94 68.92 ...
+*trait_3 147.87 - - 38.53 103.83 95.51 20.05 72.69 66.74 136.95 78.57 ...
+*trait_4 57.52 143.51 128.02 41.53 122.34 100.11 123.41 74.11 119.22 ...
+*trait_5 125.69 197.13 - 152.77 74.41 188.16 64.8 108.04 89.6 154.62 ...
+...
+\end{lstlisting}
+
 \chapter{Generated outputs}
 
 \begin{appendices}