Commit 6ef8d0f5 authored by damien's avatar damien
Browse files

Added examples and R script to package.

parent 4637465c
......@@ -24,12 +24,7 @@
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<change type="NEW" beforePath="" afterPath="$PROJECT_DIR$/doc/man/spell-qtl-examples.1.md" />
<change type="MODIFICATION" beforePath="$PROJECT_DIR$/.idea/workspace.xml" afterPath="$PROJECT_DIR$/.idea/workspace.xml" />
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<change type="MODIFICATION" beforePath="$PROJECT_DIR$/doc/man/spell-pedigree.1.md" afterPath="$PROJECT_DIR$/doc/man/spell-pedigree.1.md" />
<change type="MODIFICATION" beforePath="$PROJECT_DIR$/doc/man/spell-qtl.1.md" afterPath="$PROJECT_DIR$/doc/man/spell-qtl.1.md" />
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<ignored path="$PROJECT_DIR$/cmake-build-release/" />
<option name="EXCLUDED_CONVERTED_TO_IGNORED" value="true" />
......@@ -90,8 +85,8 @@
<file leaf-file-name="CMakeLists.txt" pinned="false" current-in-tab="true">
<entry file="file://$PROJECT_DIR$/CMakeLists.txt">
<provider selected="true" editor-type-id="text-editor">
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......@@ -790,7 +785,7 @@
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</task>
<task id="LOCAL-00001" summary="Implemented min-cut to handle table products in huge joint domains.">
<created>1479489340278</created>
......@@ -824,7 +819,7 @@
<servers />
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......@@ -841,7 +836,7 @@
<layout>
<window_info id="Project" active="false" anchor="left" auto_hide="false" internal_type="DOCKED" type="DOCKED" visible="true" show_stripe_button="true" weight="0.1225" sideWeight="0.5" order="0" side_tool="false" content_ui="combo" />
<window_info id="TODO" active="false" anchor="bottom" auto_hide="false" internal_type="DOCKED" type="DOCKED" visible="false" show_stripe_button="true" weight="0.33" sideWeight="0.5" order="6" side_tool="false" content_ui="tabs" />
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......@@ -1231,8 +1226,8 @@
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......
......@@ -112,6 +112,8 @@ function(add_manpage manpage)
COMMAND pandoc --to man --standalone ${CMAKE_SOURCE_DIR}/doc/man/${manpage}.md -o ${manpage}
WORKING_DIRECTORY doc/man
COMMENT "Generating manpage ${manpage}")
INSTALL(FILES ${CMAKE_CURRENT_BINARY_DIR}/doc/man/${manpage}
DESTINATION share/man/man1)
endfunction()
add_manpage(spell-pedigree.1)
......@@ -141,11 +143,24 @@ add_manpage(spell-qtl-examples.1)
INSTALL(TARGETS spell-pedigree spell-marker spell-qtl DESTINATION bin)
#INSTALL(FILES
# ${CMAKE_CURRENT_BINARY_DIR}/doc/man/spell-pedigree.1
# ${CMAKE_CURRENT_BINARY_DIR}/doc/man/spell-marker.1
# ${CMAKE_CURRENT_BINARY_DIR}/doc/man/spell-qtl.1
# DESTINATION share/man/man1)
INSTALL(FILES ${CMAKE_SOURCE_DIR}/examples/read-POP.R
DESTINATION share/spell-qtl/examples)
INSTALL(FILES
${CMAKE_SOURCE_DIR}/examples/three_parents_F2/example1*.*
${CMAKE_SOURCE_DIR}/examples/three_parents_F2/README
DESTINATION share/spell-qtl/examples/three_parents_F2)
INSTALL(FILES
${CMAKE_CURRENT_BINARY_DIR}/doc/man/spell-pedigree.1
${CMAKE_CURRENT_BINARY_DIR}/doc/man/spell-marker.1
${CMAKE_CURRENT_BINARY_DIR}/doc/man/spell-qtl.1
DESTINATION share/man/man1)
${CMAKE_SOURCE_DIR}/examples/F3-outbred/F3-outbred*.*
${CMAKE_SOURCE_DIR}/examples/F3-outbred/README
DESTINATION share/spell-qtl/examples/F3-outbred)
INCLUDE(InstallRequiredSystemLibraries)
......
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